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dismo (version 1.3-14)
Species Distribution Modeling
Description
Methods for species distribution modeling, that is, predicting the environmental similarity of any site to that of the locations of known occurrences of a species.
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1.3-14
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Install
install.packages('dismo')
Monthly Downloads
10,063
Version
1.3-14
License
GPL (>= 3)
Maintainer
Robert Hijmans
Last Published
May 21st, 2023
Functions in dismo (1.3-14)
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CirclesRange
Circles range
boxplot
Box plot of model evaluation data
DistModel
Class "DistModel"
calc.deviance
Calculate deviance
Convex Hull
Convex hull model
circleHull
Circle hull model
evaluate
Model evaluation
evaluateROCR
Model testing with the ROCR package
ModelEvaluation
Class "ModelEvaluation"
ecocrop
Ecocrop model
Geographic Distance
Geographic distance model
gbif
Data from GBIF
Anguilla data
Anguilla australis distribution data
ecolim
Ecolim model
gbm.fixed
gbm fixed
bioclim
Bioclim
InvDistW
Inverse-distance weighted model
dcEvaluate
Evaluate by distance class
density
density
gbm.holdout
gbm holdout
nicheOverlap
Niche overlap
Random null model
Random null model
gbm.interactions
gbm interactions
gbm.perspec
gbm perspective plot
Evaluation plots
Plot model evaluation data
gridSample
Stratified regular sample on a grid
kfold
k-fold partitioning
pwdSample
Pair-wise distance sampling
gbm.simplify
gbm simplify
gbm.step
gbm step
dismo-package
Species distribution modeling
domain
Domain
pointValues
point values
randomPoints
Random points
mahal
Mahalanobis model
maxent
Maxent
ssb
Spatial sorting bias
geocode
Georeferencing with Google
gbm.plot
gbm plot
threshold
Find a threshold
gbm.plot.fits
gbm plot fitted values
mess
Multivariate environmental similarity surfaces (MESS)
gmap
Get a Google map
rectHull
Rectangular hull model
response
response plots
nicheEquivalency
Niche equivalency
predict
Distribution model predictions
prepareData
Prepare data for model fitting
pairs
Pair plots
plot
Plot predictor values
voronoi
Voronoi polygons
Voronoi Hull
Voronoi hull model
biovars
bioclimatic variables
acaule
Solanum acaule data