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dismo (version 1.3-16)
Species Distribution Modeling
Description
Methods for species distribution modeling, that is, predicting the environmental similarity of any site to that of the locations of known occurrences of a species.
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Install
install.packages('dismo')
Monthly Downloads
11,901
Version
1.3-16
License
GPL (>= 3)
Maintainer
Robert Hijmans
Last Published
November 25th, 2024
Functions in dismo (1.3-16)
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Anguilla data
Anguilla australis distribution data
gbm.plot
gbm plot
domain
Domain
gbm.interactions
gbm interactions
gbm.step
gbm step
gbm.perspec
gbm perspective plot
gbm.simplify
gbm simplify
mess
Multivariate environmental similarity surfaces (MESS)
nicheEquivalency
Niche equivalency
gbm.holdout
gbm holdout
kfold
k-fold partitioning
gridSample
Stratified regular sample on a grid
gbm.fixed
gbm fixed
nicheOverlap
Niche overlap
Random null model
Random null model
mahal
Mahalanobis model
Geographic Distance
Geographic distance model
InvDistW
Inverse-distance weighted model
rectHull
Rectangular hull model
geocode
Georeferencing with Google
response
response plots
gmap
Get a Google map
gbm.plot.fits
gbm plot fitted values
pairs
Pair plots
plot
Plot predictor values
prepareData
Prepare data for model fitting
ssb
Spatial sorting bias
maxent
Maxent
predict
Distribution model predictions
randomPoints
Random points
threshold
Find a threshold
voronoi
Voronoi polygons
pwdSample
Pair-wise distance sampling
pointValues
point values
Evaluation plots
Plot model evaluation data
Voronoi Hull
Voronoi hull model
CirclesRange
Circles range
calc.deviance
Calculate deviance
dcEvaluate
Evaluate by distance class
ecolim
Ecolim model
density
density
DistModel
Class "DistModel"
boxplot
Box plot of model evaluation data
Convex Hull
Convex hull model
ModelEvaluation
Class "ModelEvaluation"
circleHull
Circle hull model
acaule
Solanum acaule data
bioclim
Bioclim
dismo-package
Species distribution modeling
biovars
bioclimatic variables
gbif
Data from GBIF
evaluate
Model evaluation
ecocrop
Ecocrop model
evaluateROCR
Model testing with the ROCR package