diversitree (version 0.10-1)

diversitree-package: tools:::Rd_package_title("diversitree")

Description

tools:::Rd_package_description("diversitree")

Author

tools:::Rd_package_author("diversitree")

Maintainer: tools:::Rd_package_maintainer("diversitree")

References

Diversitree contains methods described in the following papers (all of which aside from Maddison et al. 2007 were originally published as a diversitree implementation).

• FitzJohn R.G., Maddison W.P., and Otto S.P. 2009. Estimating trait-dependent speciation and extinction rates from incompletely resolved phylogenies. systematic biology 58:595-611. Systematic Biology 58:595-611.

• FitzJohn R.G. 2010. Quantitative traits and diversification. Systematic Biology 59:619-633.

• Goldberg E.E., Lancaster L.T., Ree R.H. 2011. Phylogenetic inference of reciprocal effects between geographic range evolution and diversification. Systematic Biology 60: 451-465.

• Maddison W.P., Midford P.E., and Otto S.P. 2007. Estimating a binary character's effect on speciation and extinction. Systematic Biology 56: 701-710.

• Magnuson-Ford K. and Otto S.P. 2012. Linking the investigations of character evolution and species diversification. The American Naturalist 180: 225-245.