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dlmap (version 1.13)

Detection Localization Mapping for QTL

Description

QTL mapping in a mixed model framework with separate detection and localization stages. The first stage detects the number of QTL on each chromosome based on the genetic variation due to grouped markers on the chromosome; the second stage uses this information to determine the most likely QTL positions. The mixed model can accommodate general fixed and random effects, including spatial effects in field trials and pedigree effects. Applicable to backcrosses, doubled haploids, recombinant inbred lines, F2 intercrosses, and association mapping populations.

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Version

Install

install.packages('dlmap')

Monthly Downloads

94

Version

1.13

License

GPL-2

Maintainer

Last Published

August 9th, 2012

Functions in dlmap (1.13)

BSphe

Simulated phenotypic data
dlmap-package

DLMapping for QTL detection
dlmap-internal

Internal dlmap functions
data access

Data summaries of dlcross and dlmap objects
BSdat

Simulated data for a backcross
dlmap

Perform DLMapping
dlcross

Constructor, summary and plotting functions for dlcross format