dowser (version 2.2.0)

getSubTaxa: Get the tip labels as part of a clade defined by an internal node

Description

getSubTaxa Gets the tip labels from a clade

Usage

getSubTaxa(node, tree)

Value

A vector containing tip labels of the clade

Arguments

node

node number that defines the target clade

tree

phylo object

Examples

# Get taxa from all subtrees
data(BiopsyTrees)
tree <- BiopsyTrees$trees[[8]]
all_subtrees <- lapply(1:length(tree$nodes), function(x)getSubTaxa(x, tree))