dpcR (version 0.5)

extract_run: Extract Digital PCR Run

Description

Extract runs from a code'>dpcr object while preserving all other attributes.

Usage

extract_run(input, id)

Arguments

input

object of the class '>adpcr or '>dpcr.

id

vector of indices or names of runs.

Value

The object of the input's class ('>adpcr or '>dpcr).

Details

The extract_run function allows to choose one or more panels from an object of the '>adpcr or '>dpcr class and save it without changing other attributes. It is the most recommended method of extracting a subset from an array of panels, because it preserves class and structure of the object in contrary to standard operator Extract.

See Also

Opposite function: bind_dpcr Extract multiple runs belonging to an experiment of assay: extract_dpcr

Examples

# NOT RUN {
#sample extracting
panels <- sim_adpcr(10, 40, 1000, pos_sums = FALSE, n_panels = 50)
single_panel <- extract_run(panels, 5)
random_three <- extract_run(panels, sample.int(ncol(panels), 3))
all_but_one <- extract_run(panels, -5)

#the same for fluorescence data
fluos <- sim_dpcr(10, 40, 1000, pos_sums = FALSE, n_exp = 50, 
                   fluo = list(0.1, 0))
single_fluo <- extract_run(fluos, 5)


# }