def_manuscript

Meta information on the manuscript

create_ti_method

Provides functionality to infer trajectories from single-cell data,
represent them into a common format, and adapt them. Other biological information
can also be added, such as cellular grouping, RNA velocity and annotation.
Saelens et al. (2019) <doi:10.1038/s41587-019-0071-9>.

Robrecht Cannoodt

dynwrap

Representing and Inferring Single-Cell Trajectories

Wouter Saelens

def_manuscript function

<dl><dt>doi</dt>
<dd>A doi identifier (not an url)</dd>
<dt>google_scholar_cluster_id</dt>
<dd>The google cluster id. Finding this id is a bit tricky;
you need to find the manuscript on one of the author pages, and hover over the 'All X versions' button.
Example: <a href="https://goo.gl/Y9uLFs">google scholar page</a>, <a href="https://i.imgur.com/03eLCaO.png">screenshot</a>.</dd>
<dt>preprint_date</dt>
<dd>Date of publication of the preprint (format: YYYY-MM-DD).</dd>
<dt>publication_date</dt>
<dd>Date of publication of the peer-reviewed manuscript (format: YYYY-MM-DD).</dd></dl>

Arguments

Meta information on the manuscript — def_manuscript

<dl>

<dt>doi</dt>
<dd>A doi identifier (not an url)</dd>


<dt>google_scholar_cluster_id</dt>
<dd>The google cluster id. Finding this id is a bit tricky;
you need to find the manuscript on one of the author pages, and hover over the 'All X versions' button.
Example: <a href='https://goo.gl/Y9uLFs'>google scholar page</a>, <a href='https://i.imgur.com/03eLCaO.png'>screenshot</a>.</dd>


<dt>preprint_date</dt>
<dd>Date of publication of the preprint (format: YYYY-MM-DD).</dd>


<dt>publication_date</dt>
<dd>Date of publication of the peer-reviewed manuscript (format: YYYY-MM-DD).</dd>

</dl>

def_manuscript: Meta information on the manuscript

Description

Usage

Arguments

Examples