ecoreg (version 0.2.5)

tapplysum.fast: Simplified fast group sums

Description

A hack to speed up tapply(x, group, sum) for the special case where x is sorted by group.

Usage

tapplysum.fast(x, groups)

Value

Vector containing the group sums of x.

Arguments

x

A numeric vector.

groups

A grouping factor.

Author

C. H. Jackson <[e-mail]>

Details

Works by computing the cumulative sum of x and taking the difference at the indices where the groups change. Standard tapply can be slow when there are a large number of groups, due to the overhead of factor manipulation.

See Also

tapply

Examples

x <- factor(rep(1:1000, each=100))
y <- rnorm(1000*100)
system.time(tapply(y, x, sum))
system.time(tapplysum.fast(y, x))