The tree object is a phylogenetic tree of class 'phylo' (see read.tree) that contains data of 50 angiosperm species from the Western Swiss Alps.
ecospat.testTree is a tree contains the following species:
[1] "Rumex_acetosa" [2] "Polygonum_bistorta" [3] "Polygonum_viviparum" [4] "Rumex_crispus" [5] "Cerastium_latifolium" [6] "Silene_acaulis" [7] "Gypsophila_repens" [8] "Vaccinium_gaultherioides" [9] "Soldanella_alpina" [10] "Cruciata_laevipes" [11] "Galium_album" [12] "Galium_anisophyllon" [13] "Galium_megalospermum" [14] "Gentiana_verna" [15] "Gentiana_bavarica" [16] "Gentiana_purpurea" [17] "Gentiana_lutea" [18] "Bartsia_alpina" [19] "Rhinanthus_alectorolophus" [20] "Prunella_grandiflora" [21] "Acinos_alpinus" [22] "Plantago_alpina" [23] "Plantago_lanceolata" [24] "Veronica_officinalis" [25] "Veronica_aphylla" [26] "Veronica_alpina" [27] "Veronica_chamaedrys" [28] "Veronica_persica" [29] "Globularia_cordifolia" [30] "Globularia_nudicaulis" [31] "Myosotis_alpestris" [32] "Myosotis_arvensis" [33] "Aposeris_foetida" [34] "Centaurea_montana" [35] "Hieracium_lactucella" [36] "Leontodon_helveticus" [37] "Leontodon_autumnalis" [38] "Hypochaeris_radicata" [39] "Achillea_atrata" [40] "Achillea_millefolium" [41] "Homogyne_alpina" [42] "Senecio_doronicum" [43] "Adenostyles_glabra" [44] "Arnica_montana" [45] "Aster_bellidiastrum" [46] "Bellis_perennis" [47] "Doronicum_grandiflorum" [48] "Phyteuma_orbiculare" [49] "Phyteuma_spicatum" [50] "Campanula_rotundifolia"
Charlotte Ndiribe charlotte.ndiribe@unil.ch, Nicolas Salamin nicolas.salamin@unil.ch and Antoine Guisan antoine.guisan@unil.ch
Ndiribe, C., L. Pellissier, S. Antonelli, A. Dubuis, J. Pottier, P. Vittoz, A. Guisan and N. Salamin. 2013. Phylogenetic plant community structure along elevation is lineage specific. Ecology and Evolution, 3, 4925-4939.
fpath <- system.file("extdata", "ecospat.testTree.tre", package="ecospat")
library(ape)
tree <- read.tree(fpath)
plot(tree)
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