as.matrix.DGEList

additional arguments, not used for these methods.


Coerce a digital gene expression object into a numeric matrix by extracting the count values.


array

as.matrix

Differential expression analysis of RNA-seq expression profiles with biological replication. Implements a range of statistical methodology based on the negative binomial distributions, including empirical Bayes estimation, exact tests, generalized linear models and quasi-likelihood tests. As well as RNA-seq, it be applied to differential signal analysis of other types of genomic data that produce counts, including ChIP-seq, SAGE and CAGE.

Yunshun Chen

edgeR

Empirical Analysis of Digital Gene Expression Data in R

as.matrix function

Coerce a digital gene expression object into a numeric matrix by extracting the count values.

as.matrix: Turn a DGEList Object into a Matrix

Description

Usage

Arguments

Value

Details

See Also