embryogrowth (version 7.1)

resultNest_4p_SSM4p: Fit using the nest database

Description

Fit using the nest database

Usage

resultNest_4p_SSM4p

Format

A list with fitted information about data(nest)

Details

Result of the fit using the nest database

References

Girondot, M., & Kaska, Y. (2014). A model to predict the thermal reaction norm for the embryo growth rate from field data. Journal of Thermal Biology, 45, 96-102. doi: 10.1016/j.jtherbio.2014.08.005

Examples

# NOT RUN {
library(embryogrowth)
data(nest)
formated <- FormatNests(nest)
# The initial parameters value can be:
# "T12H", "DHA",  "DHH", "Rho25"
# Or
# "T12L", "DT", "DHA",  "DHH", "DHL", "Rho25"
x <- structure(c(118.431040984352, 498.205702157603, 306.056280989839, 
118.189669472381), .Names = c("DHA", "DHH", "T12H", "Rho25"))
# pfixed <- c(K=82.33) or rK=82.33/39.33
pfixed <- c(rK=2.093313)
resultNest_4p_SSM4p <- searchR(parameters=x, fixed.parameters=pfixed, 
	temperatures=formated, derivate=dydt.Gompertz, M0=1.7, 
	test=c(Mean=39.33, SD=1.92))
plotR(result=resultNest_4p_SSM4p, show.hist = TRUE,
             ylim=c(0, 4), curves="ML quantiles")
# }