.enrichment_prep_df

Given a Enrichr output, order and subset criteria, returns a data frame accordingly

Provides an R interface to all 'Enrichr' databases. 'Enrichr' is a web-based tool for analysing gene sets and returns any enrichment of common annotated biological features. Quoting from their website 'Enrichment analysis is a computational method for inferring knowledge about an input gene set by comparing it to annotated gene sets representing prior biological knowledge.' See <https://maayanlab.cloud/Enrichr/> for further details.

Wajid Jawaid

enrichR

Provides an R Interface to 'Enrichr'

.enrichment_prep_df function

<dl><dt>df</dt>
<dd>Enrichr output</dd>
<dt>showTerms</dt>
<dd>Number of terms to show. Default 20.</dd>
<dt>orderBy</dt>
<dd>Column for ordering. Default "P.value"</dd></dl>

Arguments

I-Hsuan Lin <a href="/link/i-hsuan.lin%40manchester.ac.uk?package=enrichR&version=3.4" data-mini-rdoc="enrichR::i-hsuan.lin@manchester.ac.uk">i-hsuan.lin@manchester.ac.uk</a>

Author

Given a Enrichr output, order and subset criteria, returns a data frame accordingly — .enrichment_prep_df

<dl>

<dt>df</dt>
<dd>Enrichr output</dd>


<dt>showTerms</dt>
<dd>Number of terms to show. Default 20.</dd>


<dt>orderBy</dt>
<dd>Column for ordering. Default "P.value"</dd>

</dl>

I-Hsuan Lin <a href='mailto:i-hsuan.lin@manchester.ac.uk'>i-hsuan.lin@manchester.ac.uk</a>

.enrichment_prep_df: Given a Enrichr output, order and subset criteria, returns a data frame accordingly

Description

Usage

Value

Arguments

Author

Details