enviGCMS (version 0.7.1)

getmzrt2: Get the mzrt profile and group information for batch correction and plot as a list for xcms 3 object

Description

Get the mzrt profile and group information for batch correction and plot as a list for xcms 3 object

Usage

getmzrt2(xset, name = NULL)

Value

list with rtmz profile and group information

Arguments

xset

a XCMSnExp object with processed data

name

file name for csv file, default NULL

See Also

getdata2,getupload2, getmzrt, getdoe,getmzrtcsv

Examples

if (FALSE) {
library(faahKO)
cdfpath <- system.file('cdf', package = 'faahKO')
xset <- getdata2(cdfpath,
ppp = xcms::MatchedFilterParam(),
rtp = xcms::ObiwarpParam(),
gpp = xcms::PeakDensityParam())
getmzrt2(xset)
}