enviGCMS (version 0.7.1)

plotmsrt: Plot EIC of certain m/z and return dataframe for integration

Description

Plot EIC of certain m/z and return dataframe for integration

Usage

plotmsrt(data, ms, rt, n = FALSE)

Value

dataframe with with the first column RT and second column intensity of the SIM ions.

Arguments

data

imported data matrix of GC-MS

ms

m/z to be extracted

rt

vector range of the retention time

n

logical smooth or not

Examples

if (FALSE) {
matrix <- getmd(rawdata)
plotmsrt(matrix,rt = c(500,1000),ms = 300)
}