enviGCMS (version 0.7.1)

svabatch: Plot the influences of DoE and Batch effects on each peaks

Description

Plot the influences of DoE and Batch effects on each peaks

Usage

svabatch(df, dfsv, dfanova)

Value

influences plot

Arguments

df

data output from `svacor` function

dfsv

data output from `svaplot` function for corrected data

dfanova

data output from `svaplot` function for raw data

See Also

svacor, svaplot, svapca

Examples

if (FALSE) {
library(faahKO)
cdfpath <- system.file("cdf", package = "faahKO")
cdffiles <- list.files(cdfpath, recursive = TRUE, full.names = TRUE)
xset <- xcmsSet(cdffiles)
xset <- group(xset)
xset2 <- retcor(xset, family = "symmetric", plottype = "mdevden")
xset2 <- group(xset2, bw = 10)
xset3 <- fillPeaks(xset2)
df <- svacor(xset3)
dfsv <- svaplot(xset3)
dfanova <- svaplot(xset3, pqvalues = "anova")
svabatch(df,dfsv,dfanova)
}