Sets parameters controlling the graphical output of
plot
for objects of class egf
.
Supplied values override package defaults
(retrievable as defaults <- egf_control_plot()
),
which in turn override global defaults set via par
.
Below, x
, type
, time_as
, and delta
refer to the so-named arguments of plot.egf
.
egf_control_plot(window, data, predict, asymptote, box, axis, title, doubling)
A named list containing the package defaults modified according to the arguments in the call.
a named list of arguments to rect
affecting
the appearance of fitting windows.
a named list of the form list(main, short, long)
.
main
is a named list of arguments to points
affecting the appearance of observed data.
short
and long
are alternatives to main
used
for counts over intervals shorter or longer than delta
when
type = "interval"
.
short
and long
default to main
(elementwise).
a named list of the form list(value, ci)
.
value
and ci
are named lists of arguments to
lines
and polygon
affecting the
appearance of predicted curves and corresponding confidence bands.
ci[["col"]]
defaults to value[["col"]]
with added
transparency.
a named list of arguments to segments
affecting
the appearance of line segments drawn at
y = <initial exponential growth rate>
when type = "rt"
and
x[["model"]][["curve"]] = "logistic"
or "richards"
.
a named list of arguments to box
affecting
the appearance of the box drawn around the plot region on the device.
a named list of the form list(x, y)
.
x
and y
are named lists of arguments to axis
affecting the appearance of the bottom and left axes.
When time_as = "Date"
, there are minor and major bottom axes.
In this case, the major axis uses a modified version of x
that tries to ensure that it is displayed below the minor axis in
a slightly larger font.
a named list of the form list(main, sub, xlab, ylab)
.
The elements are named lists of arguments to title
affecting the appearance of plot (sub)titles and axis labels.
sub[["adj"]]
defaults to main[["adj"]]
.
a named list of the form list(legend, estimate, ci)
.
The elements are named lists of arguments to mtext
affecting the appearance of initial doubling times printed in the
top margin.
Setting an argument (or an element thereof in the case of nested lists)
to NULL
has the effect of suppressing the corresponding
plot element.