BD: Data frame of the effect of buffer compositions on DNA strand displacement
amplification. A 4-d regression data set with
with replication. This is a useful test data set for exercising function
fitting methods.
Description
The BD data frame has 89 rows and 5 columns. There are 89 runs with
four buffer components (KCL, MgCl2, KP04, dnTP) systematically varied in
a space-filliing design. The response is the DNA amplification rate.
Arguments
Format
This data frame contains the following columns:
KCl
Buffer component.
MgCl2
Buffer component.
KPO4
Buffer component.
dNTP
Buffer component, deoxyribonucleotides.
lnya
Exponential amplification rate on a log scale, i.e. the actual amplification
rate.
# fitting a DNA strand # displacement amplification surface to various buffer compositions fit<- Tps(BD[,1:4],BD$lnya,scale.type="range")
surface(fit) # plots fitted surface and contours