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flippant (version 1.5.5)

Dithionite Scramblase Assay Analysis

Description

The lipid scrambling activity of protein extracts and purified scramblases is often determined using a fluorescence-based assay involving many manual steps. flippant offers an integrated solution for the analysis and publication-grade graphical presentation of dithionite scramblase assays, as well as a platform for review, dissemination and extension of the strategies it employs. The package's name derives from a play on the fact that lipid scrambling is also sometimes referred to as 'flipping'. The package is originally published as Cotton, R.J., Ploier, B., Goren, M.A., Menon, A.K., and Graumann, J. (2017). "flippant–An R package for the automated analysis of fluorescence-based scramblase assays." BMC Bioinformatics 18, 146. .

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Version

Install

install.packages('flippant')

Monthly Downloads

273

Version

1.5.5

License

GPL (>= 3)

Last Published

April 9th, 2024

Functions in flippant (1.5.5)

flippant

flippant
extract_case_study_data

Extract the case study dataset
scramblase_assay_input_template

scramblase_assay_plot
parse_FluorS_Essence_3.8_output

parse_FluorS_Essence_3.8_output
parse_felix_32_output

parse_felix_32_output
parse_manual_output

parse_manual_output
parse_fluorimeter_output

parse_fluorimeter_output
parse_felix_gx_output

parse_felix_gx_output