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flowClust (version 3.10.1)

peakMatch: Function to match peaks across samples

Description

Uses the hungarian algorithm to match peaks across samples, one at a time using a template sample.

Usage

peakMatch(peaks, target.index, max.fill = 1e+12)

Arguments

peaks
is the matrix of peaks in the columns and samples in the rows
target.index
is the index of the template sample.
max.fill
is the value to substitute for NAs in the distance matrix. Should be very large, but if too large, will overflow and give an incorrect matching importFrom clue solve_LSAP