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flowViz (version 1.36.2)

glpoints-methods: Adding points within a gate to a plot

Description

These methods extend the lattice lpoints methods for drawing of points contained within a filter. They allow for multiple dispatch, since not all filter types need to be evaluated for plotting, but this decision should be made internally. In any case, we need the raw data in the form of a flowFrame.

Usage

## S3 method for class 'filter,flowFrame,missing':
glpoints(x, data, channels,
  verbose = TRUE, filterResult = NULL, ...)

Arguments

x
filter, filterResult or any derived filter class
data
flowFrame or missing
channels
character or missing
verbose
logical
filterResult
filterResult class
...
other arguments

Details

When plotting flowFrames using the plot method provided by flowViz, the plotted parameters are recorded, which makes it possible to correctly overlay the points within filters assuming that they are defined for the respective parameters. Warnings and error will be cast for the cases where the parameters are non-distinct or ambigious. These methods are meant to be used within lattice panel functions and are probably not of much use outside of those.

See Also

filter, flowFrame, glpolygon