map foieGras fitted or predicted locations, with or without Argos observations, optionally apply a different projection
fmap(
x,
y = NULL,
what = c("fitted", "predicted"),
conf = TRUE,
obs = FALSE,
obs.shp = 17,
by.date = TRUE,
crs = NULL,
ext.rng = c(0.05, 0.05),
size = 0.25,
col = "black",
lines = FALSE,
landfill = grey(0.6),
pal = "Zissou1",
rev = FALSE
)
a foieGras
ssm fit object with class fG_ssm
optionally, a foieGras
mpm fit object with class fG_mpm
; default is NULL
specify which location estimates to map: fitted or predicted
include confidence regions around estimated location (logical; default = TRUE, unless y is an mpm fit object then conf is FALSE)
include Argos observations on map (logical; default = FALSE)
point shape for observations (default = 17)
when mapping single tracks, should locations be coloured by date (logical; default = TRUE if nrow(x) == 1 else FALSE)
proj4string
for re-projecting locations, if NULL the
default projection ("+proj=merc") for the fitting the SSM will be used
factors to extend the plot range in x and y dimensions (can exceed 1)
size of estimated location points (size = NA will draw no points). Optionally, a vector of length 2 with size of observed locations given by 2nd value (ignored if obs = FALSE)
colour of observed locations (ignored if obs = FALSE)
logical indicating if lines are added to connect estimated locations (default = FALSE)
colour to use for land (default = grey(0.6))
hcl.colors
palette to use (default: "Zissou1"; type hcl.pals()
for options)
reverse colour palette (logical)