have_fs

Uses <code>get_fs</code> to check if FreesurferDIR is accessible or the option
<code>freesurfer.path</code> is set and returns logical

Wrapper functions that interface with 'Freesurfer'
<https://surfer.nmr.mgh.harvard.edu/>, a powerful and
commonly-used 'neuroimaging'
software, using system commands. The goal is to be able to interface with
'Freesurfer' completely in R, where you pass R objects of class 'nifti',
implemented by package 'oro.nifti', and the function executes an 'Freesurfer'
command and returns an R object of class 'nifti' or necessary output.

John Muschelli

freesurfer

Wrapper Functions for 'Freesurfer'

Athanasia Mo Mowinckel

have_fs function

<dl><dt>...</dt>
<dd>options to pass to <code>get_fs</code></dd>
<dt>check_license</dt>
<dd>Should a license file be checked to exist?</dd></dl>

Arguments

Logical check if Freesurfer is accessible — have_fs

<dl>

<dt>...</dt>
<dd>options to pass to <code>get_fs</code></dd>


<dt>check_license</dt>
<dd>Should a license file be checked to exist?</dd>

</dl>

have_fs: Logical check if Freesurfer is accessible

Description

Usage

Value

Arguments

Examples