reconner: Reconstruction Helper for recon from Freesurfer
Description
Wrapper for the recon-all
function in Freesurfer
Usage
reconner(
infile = NULL,
outdir = NULL,
subjid = NULL,
verbose = TRUE,
opts = "-all",
force = FALSE
)
Arguments
- infile
Input filename (dcm or nii)
- outdir
Output directory
- subjid
subject id
- verbose
print diagnostic messages
- opts
Additional options
- force
Force running of the reconstruction