fsl_anat

(character) image to be manipulated, should be full path

file

modality

(character) output directory, if none specified, will
default to <code>dirname(file)</code>

outdir

(logical) to be passed to <code><a href="/link/system?package=fslr&version=1.3" rd-options="" data-mini-rdoc="fslr::system">system</a></code>

intern

(character) operations to be passed to <code>fsl_anat</code>

opts

(logical) print out command before running

verbose

options passed to <code><a href="/link/checkimg?package=fslr&version=1.3" rd-options="" data-mini-rdoc="fslr::checkimg">checkimg</a></code>

This function calls <code>fast</code> from FSL

Wrapper functions that interface with FSL
    (http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/), a powerful and commonly-used
    neuroimaging software, using system commands. The goal is to be able to
    interface with FSL completely in R, where you pass R nifti objects and the
    function executes an FSL command and returns an R nifti object if desired.

fsl_anat: FSL FAST

Description

Usage

Arguments

Value