Usage
fslroi(file, xmin = NULL, xsize = NULL, ymin = NULL, ysize = NULL, zmin = NULL, zsize = NULL, tmin = NULL, tsize = NULL, outfile = NULL, retimg = TRUE, reorient = FALSE, intern = FALSE, verbose = TRUE, ...)
Arguments
file
(character) image to be manipulated
xmin
Minimum index for x-dimension
xsize
Size of ROI in x-dimension
ymin
Minimum index for y-dimension
ysize
Size of ROI in y-dimension
zmin
Minimum index for z-dimension
zsize
Size of ROI in z-dimension
tmin
Minimum index for t-dimension
tsize
Size of ROI in t-dimension
outfile
(character) resultant image name (optional)
retimg
(logical) return image of class nifti
reorient
(logical) If retimg, should file be reoriented when read in?
Passed to readnii. intern
(logical) to be passed to system verbose
(logical) print out command before running
...
additional arguments passed to readnii.