download_fsl

Wrapper functions that interface with 'FSL'
<http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/>, a powerful and commonly-used 'neuroimaging'
software, using system commands. The goal is to be able to interface with 'FSL'
completely in R, where you pass R objects of class 'nifti', implemented by
package 'oro.nifti', and the function executes an 'FSL' command and returns an R
object of class 'nifti' if desired.

John Muschelli

fslr

Wrapper Functions for 'FSL' ('FMRIB' Software Library) from
Functional MRI of the Brain ('FMRIB')

download_fsl function

<dl><dt>os</dt>
<dd>Operating system</dd>
<dt>outdir</dt>
<dd>Output directory for tarball</dd>
<dt>overwrite</dt>
<dd>If <code>file.path(outdir, tarball_name)</code> exists,
should it be overwritten?</dd>
<dt>...</dt>
<dd>Arguments to pass to <code><a href="/link/download.file?package=fslr&version=2.25.3" data-mini-rdoc="fslr::download.file">download.file</a></code></dd></dl>

Arguments

Download FSL — download_fsl

<dl>

<dt>os</dt>
<dd>Operating system</dd>


<dt>outdir</dt>
<dd>Output directory for tarball</dd>


<dt>overwrite</dt>
<dd>If <code>file.path(outdir, tarball_name)</code> exists,
should it be overwritten?</dd>


<dt>...</dt>
<dd>Arguments to pass to <code><a href='https://rdrr.io/r/utils/download.file.html'>download.file</a></code></dd>

</dl>

download_fsl: Download FSL

Description

Usage

Value

Arguments