This function calls fslchfiletype
fslchfiletype(
file,
filetype = "NIFTI_GZ",
outfile = NULL,
retimg = TRUE,
reorient = FALSE,
intern = FALSE,
verbose = TRUE,
...
)
If retimg
then object of class nifti. Otherwise,
Result from system command, depends if intern is TRUE or FALSE.
(character) image to be manipulated
filetype to change image to
Output filename. If NULL, will overwrite input file
(logical) return image of class nifti
(logical) If retimg
, should file be reoriented when read in?
Passed to readnii
.
(logical) to be passed to system
(logical) print out command before running
additional arguments passed to readnii
.