This function calls fslcpgeom
fslcpgeom(
file,
file_with_header,
retimg = TRUE,
reorient = FALSE,
intern = FALSE,
opts = "",
verbose = TRUE,
...
)
If retimg
then object of class nifti. Otherwise,
Result from system command, depends if intern is TRUE or FALSE.
(character) image to be manipulated
image with header to be copied over
(logical) return image of class nifti
(logical) If retimg, should file be reoriented when read in?
Passed to readnii
.
(logical) to be passed to system
(character) operations to be passed to fslmaths
(logical) print out command before running
additional arguments passed to readnii
.