This function calls fslorient
fslorient(
file,
retimg = TRUE,
reorient = FALSE,
intern = FALSE,
opts = "",
verbose = TRUE,
...
)
If retimg
then object of class nifti. Otherwise,
Result from system command, depends if intern is TRUE or FALSE.
(character) image to be manipulated
(logical) return image of class nifti
(logical) If retimg
, should file be reoriented when read in?
Passed to readnii
.
(logical) to be passed to system
(character) operations to be passed to fslorient
(logical) print out command before running
additional arguments passed to readnii
.