fslorienter

This function calls <code>fslorient -getorient</code> and is a 
simple wrapper of <code>fslorient</code>

Wrapper functions that interface with 'FSL'
<http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/>, a powerful and commonly-used 'neuroimaging'
software, using system commands. The goal is to be able to interface with 'FSL'
completely in R, where you pass R objects of class 'nifti', implemented by
package 'oro.nifti', and the function executes an 'FSL' command and returns an R
object of class 'nifti' if desired.

John Muschelli

fslr

Wrapper Functions for 'FSL' ('FMRIB' Software Library) from
Functional MRI of the Brain ('FMRIB')

fslorienter function

<dl><dt>file</dt>
<dd>(character) image to be manipulated</dd>
<dt>opts</dt>
<dd>option to send to fslorient</dd>
<dt>verbose</dt>
<dd>(logical) print out command before running</dd></dl>

Arguments

Wrapper for FSL Get Orientation — fslorienter

<dl>

<dt>file</dt>
<dd>(character) image to be manipulated</dd>


<dt>opts</dt>
<dd>option to send to fslorient</dd>


<dt>verbose</dt>
<dd>(logical) print out command before running</dd>

</dl>

fslorienter: Wrapper for FSL Get Orientation

Description

Usage

Value

Arguments