fslr (version 2.25.3)

fslstats: FSL Stats

Description

This function calls fslstats

Usage

fslstats(file, opts = "", verbose = TRUE, ts = FALSE, ...)

Value

Result of fslstats command

Arguments

file

(character) filename of image to be checked

opts

(character) operation passed to fslstats

verbose

(logical) print out command before running

ts

(logical) is the series a timeseries (4D), invoking -t option

...

options passed to checkimg

Examples

if (have.fsl()){
system.time({
x = array(rnorm(1e6), dim = c(100, 100, 100))
img = nifti(x, dim= c(100, 100, 100), 
datatype = convert.datatype()$FLOAT32, cal.min = min(x), 
cal.max = max(x), pixdim = rep(1, 4))
entropy = fslstats(img, opts='-E')
})
}