gRbase (version 2.0.1)

graph_vpar: List of vertices and their parents for graph.

Description

Get list of vertices and their parents for graph.

Usage

vchi(object, getv = TRUE, forceCheck = TRUE)
vchiMAT(object, getv = TRUE, forceCheck = TRUE)
vpar(object, getv = TRUE, forceCheck = TRUE)
vparMAT(object, getv = TRUE, forceCheck = TRUE)

Value

A list of vectors where each vector will have the form (v, pa1, pa2, ... paN) where pa1, pa2, ... paN

are the parents of v.

Arguments

object

An object representing a graph. Valid objects are an adjacency matrix or as a graphNEL.

getv

The result is by default a list of vectors of the form (v, pa1, pa2, ... paN) where pa1, pa2, ... paN are the parents of v. If getv is FALSE then the vectors will have the form (pa1, pa2, ... paN)

forceCheck

Logical indicating if it should be checked that the object is a DAG.

See Also

dag, ug

Examples

## DAGs
dag_mat <- dag(~a:b:c + c:d:e, result="matrix")
dag_ig <- dag(~a:b:c + c:d:e)
vpar(dag_mat)
vpar(dag_ig)
vpar(dag_mat, getv=FALSE)
vpar(dag_ig, getv=FALSE)
## Undirected graphs
ug_mat <- ug(~a:b:c + c:d:e, result="matrix")
ug_ig <- ug(~a:b:c + c:d:e)
if (FALSE) {
## This will fail because the adjacency matrix is symmetric and the
## graphNEL has undirected edges
vpar(ug_mat)
vpar(ug_ig)
}
## When forceCheck is FALSE, it will not be detected that the
#g raphs are undirected.
vpar(ug_mat, forceCheck=FALSE)
vpar(ug_ig, forceCheck=FALSE)