allele.recode

As first reported [Zhao, J. H. 2007. "gap: Genetic Analysis Package". J Stat Soft 23(8):1-18.
<doi:10.18637/jss.v023.i08>], it is designed as an integrated package for genetic data
analysis of both population and family data. Currently, it contains functions for
sample size calculations of both population-based and family-based designs, probability
of familial disease aggregation, kinship calculation, statistics in linkage analysis,
and association analysis involving genetic markers including haplotype analysis with or
without environmental covariates. Over years, the package has been developed in-between
many projects hence also in line with the name (gap).

Jing Zhao

Genetic Analysis Package

Jing Hua Zhao

Kurt Hornik

Brian Ripley

Uwe Ligges

Achim Zeileis

allele.recode function

<dl><dt>a1</dt>
<dd>first allele.</dd>
<dt>a2</dt>
<dd>second allele.</dd>
<dt>miss.val</dt>
<dd>missing value.</dd></dl>

Arguments

Allele recoding — allele.recode

<dl>

<dt>a1</dt>
<dd>first allele.</dd>


<dt>a2</dt>
<dd>second allele.</dd>


<dt>miss.val</dt>
<dd>missing value.</dd>

</dl>

Allele recoding

allele.recode: Allele recoding

Description

Usage

Arguments