genomes (version 3.2.0)

reports: Genome and assembly reports

Description

Genome and assembly reports from the NCBI genomes FTP

Usage

reports(file, assembly = FALSE, ...)

Arguments

file

file name, if missing then the files in the FTP directory are listed

assembly

use ASSEMBLY_REPORTS directory, default is GENOME_REPORTS

...

additional options passed to read_delim

Value

Details

Uses read_delim in the readr package to read genome or assembly reports in the genomes FTP

References

See ftp://ftp.ncbi.nih.gov/genomes/GENOME_REPORTS and ftp://ftp.ncbi.nih.gov/genomes/ASSEMBLY_REPORTS

Examples

reports()
## Not run: 
# proks <- reports("prokaryotes.txt") 
# ## End(Not run)