runtimes_protein

datasets

We provide two primary resources in 'ggCompNet'. The first is a function to compare the speed of network drawing using several different packages. The second is the vignette folder which contains two vignettes that provide code for reproducing examples comparing the three network visualization packages 'geomnet', 'ggnetwork', and the ggnet2() function from the 'GGally' package.

Samantha Tyner

ggCompNet

Compare Timing of Network Visualizations

runtimes_protein function

a data frame consisting of 100 comparison runs across five different packages
<ul>
<li> iteration iteration number.
 </li>
<li> igraph runtime under the igraph package.
 </li>
<li> network runtime under the network package.
 </li>
<li> ggnet2 runtime under the <code>GGally::</code><code><a rd-options="GGally" href="/link/ggnet2?package=ggCompNet&version=0.1.0&to=GGally" data-mini-rdoc="GGally::ggnet2">ggnet2</a></code> function.
 </li>
<li> geomnet runtime under the geomnet package.
 </li>
<li> ggnetwork runtime under the ggnetwork package.
</li>
</ul>

Format

a data frame consisting of 100 comparison runs across five different packages
<ul>
<li> iteration iteration number.
 </li>
<li> igraph runtime under the igraph package.
 </li>
<li> network runtime under the network package.
 </li>
<li> ggnet2 runtime under the <code>GGally::</code><code><a rd-options='GGally' href='ggnet2'>ggnet2</a></code> function.
 </li>
<li> geomnet runtime under the geomnet package.
 </li>
<li> ggnetwork runtime under the ggnetwork package.
</li>
</ul>

runtimes_protein: Runtime results from protein example

Description

Usage

Arguments

Format