param_table

At Novartis, we aimed at standardizing the set of diagnostic plots used for modeling
activities in order to reduce the overall effort required for generating such plots.
For this, we developed a guidance that proposes an adequate set of diagnostics and a toolbox,
called 'ggPMX' to execute them. 'ggPMX' is a toolbox that can generate all diagnostic plots at a quality sufficient
for publication and submissions using few lines of code. This package focuses on plots recommended by ISoP
<doi:10.1002/psp4.12161>. While not required, you can get/install the 'R' 'lixoftConnectors'
package in the 'Monolix' installation, as described at the following url
<https://monolix.lixoft.com/monolix-api/lixoftconnectors_installation/>.
When 'lixoftConnectors' is available, 'R' can use 'Monolix' directly to create the required
Chart Data instead of exporting it from the 'Monolix' gui.

Matthew Fidler

ggPMX

'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME
Models

param_table function

<dl><dt>ctr</dt>
<dd>Generated controller from e.g. <code>pmx_mlx</code> for Monolix.</dd>
<dt>fun</dt>
<dd><code>character</code> can be "sd" or "var" for shrinkage computation, see <code>pmx_comp_shrink</code></dd>
<dt>return_table</dt>
<dd>If TRUE, returns the same table as in get_data('estimates') otherwise it returns a kable</dd>
<dt>scientific</dt>
<dd><code>logical</code> set to TRUE to get scientific notation of parameter values, or FALSE otherwise</dd>
<dt>digits</dt>
<dd><code>integer</code> the number of significant digits to use when rounding parameter values</dd></dl>

Arguments

Creates parameter kable — param_table

<dl>

<dt>ctr</dt>
<dd>Generated controller from e.g. <code>pmx_mlx</code> for Monolix.</dd>


<dt>fun</dt>
<dd><code>character</code> can be "sd" or "var" for shrinkage computation, see <code>pmx_comp_shrink</code></dd>


<dt>return_table</dt>
<dd>If TRUE, returns the same table as in get_data('estimates') otherwise it returns a kable</dd>


<dt>scientific</dt>
<dd><code>logical</code> set to TRUE to get scientific notation of parameter values, or FALSE otherwise</dd>


<dt>digits</dt>
<dd><code>integer</code> the number of significant digits to use when rounding parameter values</dd>

</dl>

param_table: Creates parameter kable

Description

Usage

Value

Arguments

Examples