quad_layout: Arrange plots in the quad-side of a main plot

Description

This function arranges plots around the quad-sides of a main plot, aligning both horizontal and vertical axes, and can handle either discrete or continuous variables.

If xlim is provided, a continuous variable will be required and aligned in the vertical direction. Otherwise, a discrete variable will be required and aligned.
If ylim is provided, a continuous variable will be required and aligned in the horizontal direction. Otherwise, a discrete variable will be required and aligned.

The quad_discrete is a special case where both xlim and ylim are not provided.

The quad_continuous is a special case where both xlim and ylim are provided.

For historical reasons, the following aliases are available:

quad_alignh: Align discrete variables in the horizontal direction and continuous variables in vertical direction.
quad_alignv: Align discrete variables in the vertical direction and continuous variables in horizontal direction.
quad_alignb is an alias for quad_discrete.
quad_free is an alias for quad_continuous.

Usage

quad_layout(
  data = waiver(),
  mapping = aes(),
  xlim = waiver(),
  ylim = waiver(),
  ...,
  theme = NULL,
  active = NULL,
  width = NA,
  height = NA
)
quad_alignh(..., ylim = waiver())
quad_alignv(..., xlim = waiver())
quad_discrete(
  data = waiver(),
  mapping = aes(),
  ...,
  theme = NULL,
  active = NULL,
  width = NA,
  height = NA
)
quad_continuous(
  data = waiver(),
  mapping = aes(),
  xlim = NULL,
  ylim = NULL,
  ...,
  theme = NULL,
  active = NULL,
  width = NA,
  height = NA
)

Value

A QuadLayout object.

Arguments

data

Default dataset to use for the layout. If not specified, it must be supplied in each plot added to the layout. By default, this will attempt to inherit from the parent layout.

If both xlim and ylim are provided, a data frame is required, and fortify_data_frame() will be used to convert the data to a data frame. When inherited by an annotation stack, no transposition will be applied.

Otherwise, a matrix is required, and fortify_matrix() will be used to convert the data to a matrix. When inherited by the column annotation stack, the data will be transposed.

mapping

Default list of aesthetic mappings to use for main plot in the layout. If not specified, must be supplied in each layer added to the main plot.

xlim, ylim

A continuous_limits() object specifying the left/lower limit and the right/upper limit of the scale. Used to align the continuous axis.

...

Additional arguments passed to fortify_data_frame() or fortify_matrix().

theme

A theme() object used to customize various elements of the layout, including guides, title, subtitle, caption, margins, panel.border, and background. By default, the theme will inherit from the parent layout. It also controls the panel spacing for all plots in the layout.

active

A active() object that defines the context settings when added to a layout.

width, height

The relative width/height of the main plot, can be a unit object.

ggplot2 specification

If either xlim or ylim is not provided, the data input will be converted to a matrix using fortify_matrix(), and the data in the underlying main plot will contain the following columns:

.panel_x and .panel_y: the column and row panel groups.
.x and .y: an integer index of x and y coordinates
.discrete_x and .discrete_y: a factor of the data labels (only applicable when .row_names and .column_names exists).
.row_names and .column_names: A character of the row and column names of the original matrix (only applicable when names exist).
.row_index and .column_index: the row and column index of the original matrix.
value: the actual matrix value.

Otherwise, the data input will be used for the main plot.