gggenomes (version 1.0.1)

emale_tirs: Terminal inverted repeats of 6 EMALE genomes

Description

Terminal inverted repeats of 6 EMALE genomes

Usage

emale_tirs

Format

A data frame with 3 rows and 14 columns

file_id

name of the file the data was read from

seq_id

identifier of the sequence the feature appears on

start

start of the feature on the sequence

end

end of the feature on the sequence

strand

reading orientation relative to sequence (+ or -)

type

feature type (CDS, mRNA, gene, ...)

feat_id

unique identifier of the feature

introns

a list column with internal intron start/end positions

parent_ids

a list column with parent IDs - feat_id's of parent features

source

source of the annotation

score

score of the annotation

phase

For "CDS" features indicates where the next codon begins relative to the 5' start

name

name of the feature

width

end-start+1

geom_id

an identifier telling the which features should be plotted as on items (usually CDS and mRNA of same gene)