ggsci (version 2.9)

scale_color_gsea: The GSEA GenePattern Color Scales

Description

See pal_gsea for details.

Usage

scale_color_gsea(palette = c("default"), alpha = 1, reverse = FALSE, ...)
scale_colour_gsea(palette = c("default"), alpha = 1, reverse = FALSE, ...)
scale_fill_gsea(palette = c("default"), alpha = 1, reverse = FALSE, ...)

Arguments

palette

Palette type. Currently there is one available option: "default" (continuous palette with 12 base colors).

alpha

Transparency level, a real number in (0, 1]. See alpha in rgb for details.

reverse

Logical. Should the order of the colors be reversed?

...

additional parameters for discrete_scale

Author

Nan Xiao <> | <https://nanx.me>

Examples

library("ggplot2")
library("reshape2")
data("mtcars")

cor = cor(mtcars)
cor_melt = melt(cor)

ggplot(cor_melt,
       aes(x = Var1, y = Var2, fill = value)) +
  geom_tile(colour = "black", size = 0.3) +
  theme_bw() + scale_fill_gsea()