PlotTypeDistribution

Plot the distribution of gene types

Nucleotide conversion sequencing experiments have been
developed to add a temporal dimension to RNA-seq and single-cell RNA-seq. Such
experiments require specialized tools for primary processing such as GRAND-SLAM,
(see 'Jürges et al' <doi:10.1093/bioinformatics/bty256>) and specialized tools for
downstream analyses. 'grandR' provides a comprehensive toolbox for quality control,
kinetic modeling, differential gene expression analysis and visualization of such data.

Florian Erhard

grandR

Comprehensive Analysis of Nucleotide Conversion Sequencing Data

Teresa Rummel

Lygeri Sakellaridi

Kevin Berg

PlotTypeDistribution function

<dl><dt>data</dt>
<dd>the grandR object to get the data to be plotted from</dd>
<dt>mode.slot</dt>
<dd>which mode and slot to use</dd>
<dt>relative</dt>
<dd>show percentage values?</dd></dl>

Arguments

Plot the distribution of gene types — PlotTypeDistribution

<dl>

<dt>data</dt>
<dd>the grandR object to get the data to be plotted from</dd>


<dt>mode.slot</dt>
<dd>which mode and slot to use</dd>


<dt>relative</dt>
<dd>show percentage values?</dd>

</dl>

PlotTypeDistribution: Plot the distribution of gene types

Description

Usage

Value

Arguments