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grex

grex offers a minimal dependency solution for mapping Ensembl gene IDs to Entrez IDs, HGNC gene symbols, and UniProt IDs, for Genotype-Tissue Expression (GTEx) data.

Installation

Install grex from CRAN:

install.packages("grex")

Or try the development version on GitHub:

# install.packages("devtools")
devtools::install_github("nanxstats/grex")

Browse the vignette (or open with vignette("grex") in R) for a quick-start guide.

Contribute

To contribute to this project, please take a look at the Contributing Guidelines first. Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.

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Install

install.packages('grex')

Monthly Downloads

219

Version

1.9

License

GPL-3 | file LICENSE

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Last Published

May 17th, 2019

Functions in grex (1.9)

gtexv6

Ensembl IDs from GTEx V6 Gene Read Count Data
cleanid

Remove Version Numbers in Raw GTEx (GENCODE) Gene IDs
grex

Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
gtexv7

Ensembl IDs from GTEx V7 Gene Read Count Data
gtexv6p

Ensembl IDs from GTEx V6p Gene Read Count Data