growthrates_fit-class

nonlinear_fit-class

easylinear_fit-class

smooth.spline_fit-class

multiple_fits-class

multiple_fits

multiple_easylinear_fits-class

multiple_nonlinear_fits-class

multiple_smooth.spline_fits-class

<code>growthrates_fit</code>: top-level class representing a growthrates fit with
any method.

A collection of methods to determine growth rates from
experimental data, in particular from batch experiments and
plate reader trials.

Thomas Petzoldt

growthrates

Estimate Growth Rates from Experimental Data

growthrates_fit-class function

<dl>
<dt><code>FUN</code></dt>
<dd>model function used.</dd></dl>
<dt><code>fit</code></dt>
<dd>results of the model fit.</dd>
<dt><code>obs</code></dt>
<dd>observation data used for model fitting.</dd>
<dt><code>rsquared</code></dt>
<dd>coefficient of determination.</dd>
<dt><code>par</code></dt>
<dd>parameters of the fit.</dd>
<dt><code>ndx</code></dt>
<dd>index values of the time points used (for <code>easylinear_fit</code>).</dd>
<dt><code>xy</code></dt>
<dd>x and y values at the maximum of the spline.</dd>

Slots

S4 Classes of Package growthrates — growthrates_fit-class

<dl>
<dt><code>FUN</code></dt>
<dd>model function used.</dd>


<dt><code>fit</code></dt>
<dd>results of the model fit.</dd>


<dt><code>obs</code></dt>
<dd>observation data used for model fitting.</dd>


<dt><code>rsquared</code></dt>
<dd>coefficient of determination.</dd>


<dt><code>par</code></dt>
<dd>parameters of the fit.</dd>


<dt><code>ndx</code></dt>
<dd>index values of the time points used (for <code>easylinear_fit</code>).</dd>


<dt><code>xy</code></dt>
<dd>x and y values at the maximum of the spline.</dd>


</dl>

S4 Classes of Package growthrates

growthrates_fit-class: S4 Classes of Package growthrates

Description

Arguments

Slots