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gwerAM (version 1.0)
Controlling the genome-wide type I error rate in association mapping experiments
Description
This package provides functions to calculate the significance threshold for controlling the type I error rate in mixed-model association mapping analyses.
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Version
Version
1.0
Install
install.packages('gwerAM')
Monthly Downloads
13
Version
1.0
License
GPL (>= 2)
Maintainer
Benjamin Stich
Last Published
October 29th, 2012
Functions in gwerAM (1.0)
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maizeW
Marker matrix required for "gwerAM()"
maizevarianceA
Genotypic variance required for "gwerAM()"
gwerAM
Calculates signifance thresholds for mixed-model association mapping
gwerAM-internal
Internal gwerAM Functions
maizevarianceE
Error variance required for "gwerAM()"
maizeA
Numerator relationship matrix required for "gwerAM()"
maizeQ
Population structure matrix required for "gwerAM()"