annot_cm

Annotate genetic distance between markers

internal

Haplotype-aware Hidden Markov Model for RNA (HaHMMR) is a method for detecting copy number variations (CNVs) from bulk RNA-seq data. Additional examples, documentations, and details on the method are available at <https://github.com/kharchenkolab/hahmmr/>.

Teng Gao

hahmmr

Haplotype-Aware Hidden Markov Model for RNA

Evan Biederstedt

Peter Kharchenko

annot_cm function

<dl><dt>bulk</dt>
<dd>dataframe Pseudobulk profile</dd>
<dt>genetic_map</dt>
<dd>dataframe Genetic map</dd></dl>

Arguments

Annotate genetic distance between markers — annot_cm

<dl>

<dt>bulk</dt>
<dd>dataframe Pseudobulk profile</dd>


<dt>genetic_map</dt>
<dd>dataframe Genetic map</dd>

</dl>

annot_cm: Annotate genetic distance between markers

Description

Usage

Value

Arguments