annot_segs

Annotate copy number segments after HMM decoding

internal

Haplotype-aware Hidden Markov Model for RNA (HaHMMR) is a method for detecting copy number variations (CNVs) from bulk RNA-seq data. Additional examples, documentations, and details on the method are available at <https://github.com/kharchenkolab/hahmmr/>.

Teng Gao

hahmmr

Haplotype-Aware Hidden Markov Model for RNA

Evan Biederstedt

Peter Kharchenko

annot_segs function

<dl><dt>bulk</dt>
<dd>dataframe Pseudobulk profile</dd></dl>

Arguments

Annotate copy number segments after HMM decoding — annot_segs

<dl>

<dt>bulk</dt>
<dd>dataframe Pseudobulk profile</dd>

</dl>

annot_segs: Annotate copy number segments after HMM decoding

Description

Usage

Value

Arguments