residuals.haplo.glm: Accessing residuals for haplo.glm fit
Description
Access the residuals from a haplo.glm model fit
Usage
## S3 method for class 'haplo.glm':
residuals(object, type=c("deviance", "pearson",
"working", "response"), ...)
Arguments
object
A haplo.glm object
type
Type of residuals to return. Options are "deviance" (default),
"pearson", "working", and "response". Partial residuals not supported
in this method.
...
Optional arguments
Value
Residuals for each person in the model.
Details
Many of the subjects in a haplo.glm fit are expanded in the model
matrix with weights used to reflect the posterior probability of the
subject's haplotype pairs given their genotype. The working residuals
within the fitted object are from this expanded model matrix, and the
residuals in this method are calculated from the weighted fitted value
for the subject across all their haplotype pairs.