na.geno.keep

Removes rows with NA in response or covariates, but keeps subjects
 with NAs in their genotypes if not missing all alleles.

Routines for the analysis of indirectly measured haplotypes. The statistical methods assume that all subjects are unrelated and that haplotypes are ambiguous (due to unknown linkage phase of the genetic markers). The main functions are: haplo.em(), haplo.glm(), haplo.score(), and haplo.power(); all of which have detailed examples in the vignette.

Jason Sinnwell

haplo.stats

Statistical Analysis of Haplotypes with Traits and Covariates
when Linkage Phase is Ambiguous

Schaid Daniel

Jason P. Sinnwell

na.geno.keep function

<dl><dt>m</dt>
<dd>model matrix</dd></dl>

Arguments

Remove rows with NA in covariates, but keep genotypes with NAs — na.geno.keep

<dl>

<dt>m</dt>
<dd>model matrix</dd>

</dl>

na.geno.keep: Remove rows with NA in covariates, but keep genotypes with NAs

Description

Usage

Value

Arguments