cell_lines

<p>List of metadata table and scaled PCs matrix</p>

datasets

Implementation of the Harmony algorithm for single cell integration, described in Korsunsky et al <doi:10.1038/s41592-019-0619-0>. Package includes a standalone Harmony function and interfaces to external frameworks.

Ilya Korsunsky

harmony

Fast, Sensitive, and Accurate Integration of Single Cell Data

Martin Hemberg

Nikolaos Patikas

Hongcheng Yao

Nghia Millard

Jean Fan

Kamil Slowikowski

Miles Smith

Soumya Raychaudhuri

cell_lines function

<p>:
  meta_data: data.table of 9478 rows with defining dataset and cell_type
  scaled_pcs: data.table of 9478 rows (cells) and 20 columns (PCs)</p>

Format

List of metadata table and scaled PCs matrix — cell_lines

List of metadata table and scaled PCs matrix

cell_lines: List of metadata table and scaled PCs matrix

Description

Usage

Arguments

Format