.fastdist

Calculates a symmetric matrix of distances between genotypes, based on a given genotype matrix.
Each row in the `GenotypeMatrix` represents a genotype, and each column represents a marker.
The genotype is coded as 0 for AA, 1 for AB, and 2 for BB. Use 9 to represent missing data.

Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.

Mohammad Ferdosi

hsphase

Phasing, Pedigree Reconstruction, Sire Imputation and
Recombination Events Identification of Half-sib Families Using
SNP Data

Cedric Gondro

.fastdist function

<dl><dt>GenotypeMatrix</dt>
<dd>A matrix where each row represents a genotype and each column 
represents a marker. Genotypes should be coded as 0 for AA, 1 for AB, and 2 for BB, 
with 9 representing missing data.</dd></dl>

Arguments

Calculate Genotypic Distances — .fastdist

<dl>

<dt>GenotypeMatrix</dt>
<dd>A matrix where each row represents a genotype and each column 
represents a marker. Genotypes should be coded as 0 for AA, 1 for AB, and 2 for BB, 
with 9 representing missing data.</dd>

</dl>

.fastdist: Calculate Genotypic Distances

Description

Usage

Value

Arguments

Examples