iCOBRA (version 1.0.2)

deviation: Accessor and replacement functions for deviation slot

Description

Accessor and replacement functions for the deviation slot in an COBRAPerformance or COBRAPlot object.

Usage

deviation(x, ...)
deviation(x, ...) <- value
## S3 method for class 'COBRAPerformance':
deviation(x)
## S3 method for class 'COBRAPerformance,data.frame':
deviation(x) <- value
## S3 method for class 'COBRAPlot,data.frame':
deviation(x) <- value

Arguments

x

An COBRAPerformance or COBRAPlot object.

...

Additional arguments.

value

A data frame giving information necessary to plots of deviations between observed and true scores for each method and each stratification level.

Value

• The accessor function returns a data frame giving information necessary to plots of deviations between observed and true scores for each method and each stratification level.

Examples

data(cobradata_example)
cobraperf <- calculate_performance(cobradata_example, cont_truth = "logFC",
                                   aspects = "deviation")
head(deviation(cobraperf))